gene(s)	site(s) genome coordinates	site(s) sequence	known or novel site	q-value for E.coli or E.coli-S.typhi database search	q-value with combined evidence from additional species
purT/yebG	1928852-1928867  	acgcaaacgttttcgt 	known	4.254205912005e-06	5.92494501980731e-14	
codB	354064-354079  	acgaaaacgattgctt 	known	4.4338506872625e-05	8.06154670411364e-06	
cvpA	2428840-2428855  	acgcaaacgttttctt 	known	4.459731719415e-05	5.43269200128588e-18	
purL/yfhD	2693640-2693655  	acgcaaacggtttcgt 	known	4.4959619104575e-05	2.57567969513312e-08	
purE	552395-552410  	acgcaaccgttttcct 	known	4.79902441305e-05	1.48644144220422e-11	
purH/rrsE	4205218-4205233  	gcgcaaacgttttcgt 	known	8.482568098375e-05	6.41689297590656e-14	
purM/upp	2619138-2619153  	tcgcaaacgtttgctt 	known	0.000109749374229	2.63269511056949e-15	
yjcD	4275928-4275943  4275786-4275801 	agctaaacgtttgctt acgataacgtttgcgc	novel	0.000129385328541	1.60540502535341e-10	
pyrC	1121882-1121897  	aggaaaacgtttccgc 	known	0.000159860764831833	3.19386852771986e-05	
sdaC	2925844-2925859  	acgcaaacgtttccct 	novel	0.000370389988374	2.35565044988103e-05	
gltS/yicE	3826504-3826519  	aagcaaacgtttgcca 	novel	0.000391934355167727	6.26742996171357e-06	
glyA/hmpA	2683646-2683661  	aggtaatcgtttgcgt 	known	0.0005389039507075	0.000187655453625041	
tsx	431376-431391  431388-431403  	acgcaatcgattacgt gtgtaaacgtgaacgc 	novel	0.00119021222844462	0.00291892641435037	
purC	2595792-2595807  	acgcaaacgtgtgcgt 	known	0.001412538313785	6.59671991793552e-06	
guaB/xseA	2632144-2632159  	atgcaatcggttacgc 	known	0.00273225664859	6.91824170516106e-06	
gcvT	3048778-3048793  	aagagaacgattgcgt 	known	0.0168952089107813	0.0037684312865796	
carA	29415-29430  	gcgcaagcgttttcca 	known	0.0273780821573824	0.000539377382428976	
ygeV/ygeW	3004071-3004086  	acgaaaacgtttggct 	novel	0.0369846120740833	0.0256047314359038	
b1688/ydiJ	1766918-1766933  1767058-1767073  	agtaaatcgtttgcgt gcgtcgacgatttgac 	novel	0.0519907233051316	0.109770087903001	
yhhP/yhhQ	3606689-3606704  	acgcaatcgttaacct 	novel	0.0610418216373	0.0732838629444748	
ydcP	1504735-1504750  	gggaaaactatttcgc 	novel	0.065699079537	0.0510992840843333	
ycdO	1081417-1081432  	acgcaaactcttgctt 	novel	0.1036207287675	0.121274985205419	
galS	2239784-2239799  	ctgtaaccgtttccat 	novel	0.105493071677318	0.000353867128426603	
galE	791357-791372  	gtgtaaacgattccac 	novel	0.1283732578275	0.0143364597779591	
ascF/ascG	2837448-2837463  2837372-2837387  	gtgaaaccggtttctt aggtgaccggtttcac 	novel	0.1325887390044	0.103584952347187	
yigJ	4005335-4005350  	ccgtaaacgtttcccc 	novel	0.1955754773175	0.377670661145368	
b2611/ffh	2745831-2745846  	gtggaaacggttggcc 	novel	0.203124714768889	0.480484371337828	
yfjP	2765484-2765499  	gggaacacgttttccc 	novel	0.2259431866875	0.175733589645833	
talB/yaaJ	8188-8203  8147-8162  	ggcagaccggttacat ttgtcggcggttgcgc 	novel	0.240318951161897	0.00263882936708447	
yifL	3992059-3992074  	cgctaaacgcttgctt 	novel	0.249252491393182	0.473184232964047	
galP	3086205-3086220  	gtgtaagcgattacac 	novel	0.2501631650385	0.192433203875769	
b2475	2594870-2594885  	agacaaccgctctcgg 	novel	0.251245980621774	0.0010208974058645	
ylaD	479197-479212  	atgggaacgttctctt 	novel	0.256092458110781	0.00606567900429466	
asnW	2056188-2056203  	cagcaaacgatttcaa 	novel	0.25617856458	0.21348213715	
cytR	4122115-4122130  	ctgtaaccgttttcac 	novel	0.261797221084412	0.000500173182859515	
dacB/greA	3326532-3326547  	gggtcatcgtttactt 	novel	0.263946916709583	0.0617125538231898	
yfaD	2354777-2354792  	gcgtacacgattccgt 	novel	0.285957476921351	0.240464241956591	
hcaT	2665898-2665913  	caacattcgattaacc 	novel	0.315679036027895	0.361209731229315	
purA	4402243-4402258  	aagcaaacggtgattt 	known	0.316509762592692	0.222511590131315	
b2878	3013767-3013782  	agttaaacgattgcgt 	novel	0.353627787222907	0.316791559387188	
serA	3056510-3056525  	acgcaaacgttcatat 	novel	0.353893361553375	1.86709275423547e-05