|
accB
|
| |
| Information
for accB, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
3402153-3402254
|
-
|
CDS
|
|
|
orf; hypothetical protein
|
|
3403073-3403543
|
+
|
CDS
|
accB
|
|
acetylCoA carboxylase; BCCP subunit; carrier of biotin
|
|
3403554-3404903
|
+
|
CDS
|
|
|
acetyl CoA carboxylase; biotin carboxylase subunit
|
|
| |
Reported regulatory
sites for accB:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI PA SP ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
3.000
|
3402686-3402707
|
cgtga ATTGTGCGGCTTGTTGCAAATT acacg
|
-
|
0
|
-
|
|
|
|
|
3.000
|
3402911-3402932
|
tgcac AATGTCCGTCAAGTCTAACATT gacac
|
-
|
0
|
-
|
|
|
|
|
2.692
|
3403010-3403029
|
atacg CTTTACAGACGGCGGTGAAA cgcct
|
-
|
0
|
-
|
|
|
|
|
2.553
|
3402634-3402652
|
tcagc TTTTCACCTTACGTTATAA gaagt
|
-
|
0
|
-
|
|
|
|
|
2.553
|
3402828-3402846
|
cgcag TTTTTGCGCTGCGGAAAAG gtgac
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
4.80
|
|
p=0.05
|
3.45
|
|
p=0.1
|
2.95
|
|
p=0.2
|
2.42
|
|
|