|
accD
|
| |
| Information
for accD, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
2429694-2430962
|
-
|
CDS
|
|
|
dihydrofolate:folylpolyglutamate synthetase; dihydrofolate synthetase
|
|
2431032-2431946
|
-
|
CDS
|
accD
|
|
acetylCoA carboxylase; carboxytransferase component; beta subunit
|
|
2432102-2432761
|
-
|
CDS
|
|
|
orf; hypothetical protein
|
|
| |
Reported regulatory
sites for accD:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI PA ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
3.175
|
2432048-2432066 R
|
atcca AAGTTTCGGGCTGTTATGT tttaa
|
-
|
0
|
-
|
|
|
|
|
3.175
|
2431952-2431970 R
|
cgaac CAGGTTCAGACAGAAAGGT cccta
|
-
|
0
|
-
|
|
|
|
|
3.076
|
2432062-2432080 R
|
tcgac CACTTTTTTATCCAAAGTT tcggg
|
-
|
0
|
-
|
|
|
|
|
2.405
|
2432022-2432044 R
|
gtttt AATGTGCAACATTCATGGTCTGT tgggg
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
5.41
|
|
p=0.05
|
4.01
|
|
p=0.1
|
3.43
|
|
p=0.2
|
2.86
|
|
|