aceK
 
Information for aceK, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
4214688-4215992
+
CDS
isocitrate lyase
4216175-4217911
+
CDS
aceK
isocitrate dehydrogenase kinase/phosphatase
4217880-4220066
-
CDS
regulator of acetyl CoA synthetase
 
Reported regulatory sites for aceK:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: PA ST EC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
6.446
4216022-4216045
aggcc GGATAAGGCGTTCACGCCGCATCC ggcaa
-
0
REP311a (24)
6.446
4216120-4216143
aggct GGATAAGGCGTTTACGCCGCATCC ggcaa
-
0
REP311c (24)
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
1.139
4215996-4216019
aagca ACAACAACCGTTGCTGACTGTAGG ccgga
-
0
REP311a (5)
1.139
4216094-4216117
tcatg CCTACAGCCGTTGCCGAACGTAGG ctgga
-
0
REP311b (5) REP311c (5)
0.757
4216052-4216075
gcaat CGGTGCACGATGCCTGATGCGACG cttgc
-
0
REP311b (13)
 
Critical MAP values:
p=0.01
6.66
p=0.05
5.31
p=0.1
4.59
p=0.2
3.95

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