acrD
 
Information for acrD, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
2583751-2585451
+
CDS
sensor for nitrate reductase system; protein histidine kinase (acts on NarP and narL)
2585615-2588728
+
CDS
acrD
sensitivity to acriflavine; integral membrane protein; possible efflux pump
2589267-2589623
+
CDS
orf; hypothetical protein
 
Reported regulatory sites for acrD:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: PA SP ST EC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
5.177
2585506-2585521
ggcat GATAATTTACATTAAC tcctt
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
4.026
2585555-2585571
ccttg CCGCTACAGTGAAGCAA gtcaa
-
0
-
1.067
2585535-2585554
ttctc CACGATTGGCTCGTACCTTG ccgct
-
0
-
 
Critical MAP values:
p=0.01
6.03
p=0.05
4.63
p=0.1
3.98
p=0.2
3.37

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