acrR
 
Information for acrR, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
483650-484843
-
CDS
acridine efflux pump
484985-485632
+
CDS
acrR
acrAB operon repressor
485760-489122
+
CDS
putative alpha helix protein
 
Reported regulatory sites for acrR:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: ST EC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
6.630
484893-484914
agtta ATAAACCCATTGCTGCGTTTAT attat
-
0
-
6.630
484936-484957
ggtac ATACATTCACAAATGTATGTAA atcta
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
4.542
484860-484876
gagtg TCCGATTTCAAATTGGT caatg
-
0
-
4.493
484848-484867
tatgt AAACCTCGAGTGTCCGATTT caaat
-
0
-
 
Critical MAP values:
p=0.01
7.30
p=0.05
6.05
p=0.1
5.26
p=0.2
4.60

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