|
add
|
| |
| Information
for add, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
1698981-1700153
|
+
|
CDS
|
|
|
enzyme that may degrade or block biosynthesis of endogenous mal inducer; probably aminotrasferase
|
|
1700257-1701258
|
+
|
CDS
|
add
|
|
adenosine deaminase
|
|
1701292-1702371
|
-
|
CDS
|
|
|
orf; hypothetical protein
|
|
| |
Reported regulatory
sites for add:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: PA SP ST EC VC |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
5.757
|
1700216-1700235
|
ttttt ATAATGGTGCGCACTTTTAT atcca
|
-
|
0
|
-
|
|
|
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
0.382
|
1700174-1700197
|
gtaaa AAATCGTTGCGCAATCGTGGATTT ttacc
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
5.40
|
|
p=0.05
|
4.29
|
|
p=0.1
|
3.77
|
|
p=0.2
|
3.19
|
|
|