|
adhE
|
| |
| Information
for adhE, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
1294191-1294421
|
-
|
CDS
|
|
|
orf; hypothetical protein
|
|
1294669-1297344
|
-
|
CDS
|
adhE
|
|
CoA-linked acetaldehyde dehydrogenase and iron-dependent alcohol dehydrogenase; pyruvate-formate-lyase deactivase
|
|
1297821-1298468
|
+
|
CDS
|
|
|
putative channel protein
|
|
| |
Reported regulatory
sites for adhE:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: SP ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
4.418
|
1297468-1297488 R
|
gttta AACTCTTTTAGTAAATCACAG tgagt
|
-
|
0
|
-
|
|
|
|
|
4.418
|
1297366-1297386 R
|
cgagc AGATGATTTACTAAAAAAGTT taaca
|
-
|
0
|
-
|
|
|
|
|
4.142
|
1297592-1297609 R
|
agcga TGCTGAAAGGTGTCAGCT ttgca
|
-
|
0
|
-
|
|
|
|
|
3.344
|
1297345-1297364 R
|
agttt AACATTATCAGGAGAGCATT atggc
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
6.03
|
|
p=0.05
|
4.63
|
|
p=0.1
|
3.98
|
|
p=0.2
|
3.37
|
|
|