|
agp
|
| |
| Information
for agp, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
1063259-1064515
|
+
|
CDS
|
|
|
orf; hypothetical protein
|
|
1064808-1066049
|
+
|
CDS
|
agp
|
|
periplasmic glucose-1-phosphatase
|
|
1066087-1066314
|
-
|
CDS
|
|
|
orf; hypothetical protein
|
|
| |
Reported regulatory
sites for agp:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: ST EC |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
6.013
|
1064730-1064753
|
agcca TTTTGCGAACCTGTTCCCGGAAAA aagtc
|
-
|
0
|
-
|
|
|
|
|
1.976
|
1064766-1064789
|
atttc TGTCACACTCTTTAGTGATTGATA acaaa
|
-
|
0
|
-
|
|
|
|
|
1.863
|
1064747-1064767
|
gttcc CGGAAAAAAGTCATATTTCTG tcaca
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
7.59
|
|
p=0.05
|
6.45
|
|
p=0.1
|
5.76
|
|
p=0.2
|
5.04
|
|
|