agp
 
Information for agp, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1063259-1064515
+
CDS
orf; hypothetical protein
1064808-1066049
+
CDS
agp
periplasmic glucose-1-phosphatase
1066087-1066314
-
CDS
orf; hypothetical protein
 
Reported regulatory sites for agp:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: ST EC
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
6.013
1064730-1064753
agcca TTTTGCGAACCTGTTCCCGGAAAA aagtc
-
0
-
1.976
1064766-1064789
atttc TGTCACACTCTTTAGTGATTGATA acaaa
-
0
-
1.863
1064747-1064767
gttcc CGGAAAAAAGTCATATTTCTG tcaca
-
0
-
 
Critical MAP values:
p=0.01
7.59
p=0.05
6.45
p=0.1
5.76
p=0.2
5.04

Click here to go back