|
ais
|
| |
| Information
for ais, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
2362574-2362999
|
+
|
CDS
|
|
|
orf; hypothetical protein
|
|
2363038-2363640
|
-
|
CDS
|
ais
|
|
protein induced by aluminum
|
|
2363915-2365087
|
+
|
CDS
|
|
|
putative enzyme
|
|
| |
Reported regulatory
sites for ais:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: ST EC |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
3.472
|
2363836-2363852 R
|
gatag AATATTAACTTAACCTT aagaa
|
-
|
0
|
-
|
|
|
|
|
2.959
|
2363820-2363843 R
|
ttaac TTAACCTTAAGAAACTAATATTAG acgta
|
-
|
0
|
-
|
|
|
|
|
1.010
|
2363670-2363693 R
|
aatgt AGCTCAATTTCACGGTAATTGTCT ggttg
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
7.59
|
|
p=0.05
|
6.45
|
|
p=0.1
|
5.76
|
|
p=0.2
|
5.04
|
|
|