alaS
 
Information for alaS, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
2816983-2817168
-
CDS
carbon storage regulator; controls glycogen synthesis; gluconeogenesis; cell size and surface properties
2817403-2820033
-
CDS
alaS
alanyl-tRNA synthetase
2820162-2820662
-
CDS
regulator; OraA protein
 
Reported regulatory sites for alaS:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
4.320
2820117-2820135 R
cccag TCAAGAAAACTTATCTTAT tccca
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.078
2820036-2820055 R
tttcg TTAGCTTGATTTCAGGATAA ttatg
-
0
-
1.848
2820127-2820148 R
ggtat TTTACCTTCCCAGTCAAGAAAA cttat
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

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