|
aldH
|
| |
| Information
for aldH, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
1359935-1360492
|
+
|
CDS
|
|
|
orf; hypothetical protein
|
|
1360767-1362254
|
+
|
CDS
|
aldH
|
|
aldehyde dehydrogenase; prefers NADP over NAD
|
|
1362256-1363536
|
+
|
CDS
|
|
|
probable oxidoreductase
|
|
| |
Reported regulatory
sites for aldH:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: PA SP EC |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
0.115
|
1360687-1360703
|
aataa ACGGGCATACGGCCCGG ggatc
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
3.18
|
|
p=0.05
|
2.36
|
|
p=0.1
|
2.00
|
|
p=0.2
|
1.60
|
|
|