ampC
 
Information for ampC, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
4374767-4375300
-
CDS
outer membrane lipoprotein (lipocalin)
4375389-4376522
-
CDS
ampC
beta-lactamase; penicillin resistance
4376585-4376944
-
CDS
fumarate reductase; anaerobic; membrane anchor polypeptide
 
Reported regulatory sites for ampC:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: PA SP EC
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
1.254
4376547-4376562 R
tccgg CCCGCCTATGGCGGGC cgttt
-
0
-
 
Critical MAP values:
p=0.01
3.18
p=0.05
2.36
p=0.1
2.00
p=0.2
1.60

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