aphA
 
Information for aphA, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
4264693-4265886
+
CDS
tyrosine aminotransferase; tyrosine repressible
4266993-4267706
+
CDS
aphA
diadenosine tetraphosphatase
4267817-4268233
+
CDS
orf; hypothetical protein
 
Reported regulatory sites for aphA:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI ST EC
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
2.975
4266915-4266930
ggcag CTGGCGTTATGGTCAG atggt
-
0
-
2.359
4266883-4266906
cacaa AAACCGCAGATAATCCTTCCTTTC cccgg
-
0
-
1.978
4266958-4266981
caata AAAAGTTTCAACATACTGACTATT taggg
-
0
-
 
Critical MAP values:
p=0.01
6.82
p=0.05
5.66
p=0.1
5.03
p=0.2
4.36

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