|
aphA
|
| |
| Information
for aphA, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
4264693-4265886
|
+
|
CDS
|
|
|
tyrosine aminotransferase; tyrosine repressible
|
|
4266993-4267706
|
+
|
CDS
|
aphA
|
|
diadenosine tetraphosphatase
|
|
4267817-4268233
|
+
|
CDS
|
|
|
orf; hypothetical protein
|
|
| |
Reported regulatory
sites for aphA:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI ST EC |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
2.975
|
4266915-4266930
|
ggcag CTGGCGTTATGGTCAG atggt
|
-
|
0
|
-
|
|
|
|
|
2.359
|
4266883-4266906
|
cacaa AAACCGCAGATAATCCTTCCTTTC cccgg
|
-
|
0
|
-
|
|
|
|
|
1.978
|
4266958-4266981
|
caata AAAAGTTTCAACATACTGACTATT taggg
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
6.82
|
|
p=0.05
|
5.66
|
|
p=0.1
|
5.03
|
|
p=0.2
|
4.36
|
|
|