|
appA
|
| |
| Information
for appA, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
1038519-1039655
|
+
|
CDS
|
|
|
probable third cytochrome oxidase; subunit II
|
|
1039840-1041138
|
+
|
CDS
|
appA
|
|
phosphoanhydride phosphorylase; pH 2.5 acid phosphatase; periplasmic
|
|
1041253-1043433
|
-
|
CDS
|
|
|
orf; hypothetical protein
|
|
| |
Reported regulatory
sites for appA:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: EC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
1.835
|
1039772-1039788
|
taggc CTGATGCGGCGCATTAG catcg
|
-
|
0
|
REP89 (17)
|
|
-
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
5.55
|
|
p=0.05
|
3.60
|
|
p=0.1
|
3.00
|
|
p=0.2
|
2.32
|
|
|