|
aqpZ
|
| |
| Information
for aqpZ, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
913181-914128
|
-
|
CDS
|
|
|
putative surface protein
|
|
914575-915270
|
-
|
CDS
|
aqpZ
|
|
transmembrane water channel; aquaporin Z
|
|
915696-917354
|
+
|
CDS
|
|
|
orf; hypothetical protein
|
|
| |
Reported regulatory
sites for aqpZ:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: PA SP EC |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
1.610
|
915508-915527 R
|
atcaa ATAATTAGCATGATAAATTA ttttt
|
-
|
0
|
-
|
|
|
|
|
1.610
|
915286-915305 R
|
accat ATTTTTCACAGGGTCAATTT ttaat
|
-
|
0
|
-
|
|
|
|
|
0.744
|
915476-915492 R
|
cgcct AAAGGATTAAATCTTTT gcgtg
|
-
|
0
|
-
|
|
-
|
|
|
0.299
|
915394-915412 R
|
aaatc AAATTTACTGGATTTATTT atctg
|
-
|
0
|
-
|
|
|
|
|
0.299
|
915346-915364 R
|
tttta AAATAGCCGCGCATTATTT ccgtc
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
3.18
|
|
p=0.05
|
2.36
|
|
p=0.1
|
2.00
|
|
p=0.2
|
1.60
|
|
|