|
argS
|
| |
| Information
for argS, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
1957304-1957876
|
-
|
CDS
|
|
|
orf; hypothetical protein
|
|
1958086-1959819
|
+
|
CDS
|
argS
|
|
arginine tRNA synthetase
|
|
1959975-1960484
|
+
|
CDS
|
|
|
orf; hypothetical protein
|
|
| |
Reported regulatory
sites for argS:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI PA SP ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
3.378
|
1957892-1957913
|
tcagt AAAAGCGTTAATTTACCCTGTT gccct
|
-
|
0
|
-
|
|
|
|
|
1.610
|
1957963-1957985
|
atagt GAAAACGGCAATACGCCACGCGC acgtt
|
-
|
0
|
-
|
|
|
|
|
1.610
|
1957997-1958019
|
ctgac GAAAACAGCCATTTGCAGTATAC tcccg
|
-
|
0
|
-
|
|
|
|
|
1.552
|
1958061-1958078
|
ttgct CGCTTCATCAATGTAAGG tattc
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
4.80
|
|
p=0.05
|
3.45
|
|
p=0.1
|
2.95
|
|
p=0.2
|
2.42
|
|
|