aroB
 
Information for aroB, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
3513658-3514944
-
CDS
putative membrane protein; interferes with cell division
3515036-3516124
-
CDS
aroB
3-dehydroquinate synthase
3516181-3516903
-
CDS
shikimate kinase I
 
Reported regulatory sites for aroB:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
1.532
3516167-3516183 R
gcaac TAATTCTGGCTTTATAT acact
-
0
-
1.532
3516130-3516146 R
tacag TAATTAAGGTGGATGTC gcgtt
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

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