aroH
 
Information for aroH, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1785469-1786302
+
CDS
orf; hypothetical protein
1786459-1787505
+
CDS
aroH
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (DAHP synthetase; tryptophan repressible)
1787637-1787828
+
CDS
orf; hypothetical protein
 
Reported regulatory sites for aroH:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
1786293-1786316
trpR
regulator for trp operon and aroH; trp aporepressor
 
Species with an ortholog: SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
4.222
1786305-1786325
tagag AACTAGTGCATTAGCTTATTT ttttg
-
0
-
4.222
1786438-1786458
gaagc AACAAATTTCTGAGACTTGTA atgaa
-
0
-
4.054
1786413-1786434
atcac TTCCCGGCAGTCCTGCCGTAGA agcaa
-
0
-
3.444
1786350-1786370
acccg GCGAGGTGTGACACACCTCGC acttg
-
0
-
3.444
1786392-1786412
gattg GTTTATCGTGATGCGCATCAC ttccc
-
0
-
 
Critical MAP values:
p=0.01
6.03
p=0.05
4.63
p=0.1
3.98
p=0.2
3.37

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