aroL

Information for aroL, and also upstream and downstream flanking genes:

Genome coordinates Orientation Gene type Name EcoGene Annotation 404868-405446 + CDS yaiI EG13176 orf; hypothetical protein 405629-406153 + CDS aroL EG10082 shikimate kinase II 406203-406394 + CDS yaiA EG11093 orf; hypothetical protein

Reported regulatory sites for aroL: Genome coordinates Source Transcription factor Transcription factor annotation 405522-405543 DPInteract tyrR transcriptional regulation of aroF aroG tyrA and aromatic amino acid transport 405499-405520 DPInteract tyrR transcriptional regulation of aroF aroG tyrA and aromatic amino acid transport 405446-405467 DPInteract tyrR transcriptional regulation of aroF aroG tyrA and aromatic amino acid transport

Species with an ortholog: ST EC YP

Predictions with an average map value >= the critical MAP value (p=0.05): Avg. MAP Genome coordinates Sequence Site type Overlap (bp) Repeat Model logo Prediction logo Prediction alignment 6.176 405448-405465 ctaaa TGTAATTTATTATTTACA cttca tyrR 18 - 6.176 405524-405541 ttaag TGGAATTTTTTCTTTACA atcga tyrR 18 -

Predictions with an average map value < the critical MAP value (p=0.05): Avg. MAP Genome coordinates Sequence Site type Overlap (bp) Repeat Model logo Prediction logo Prediction alignment 1.682 405503-405521 gggtg TATTGAGATTTTCACTTTA agtgg tyrR 18 - 0.582 405548-405563 tcgaa ATTGTACTAGTTTGAT ggtat - 0 -

Critical MAP values: p=0.01 7.30 p=0.05 6.05 p=0.1 5.26 p=0.2 4.60

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