|
aroP
|
| |
| Information
for aroP, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
119281-120135
|
+
|
CDS
|
|
|
regulates ampC
|
|
120178-121551
|
-
|
CDS
|
aroP
|
|
aromatic amino acid transport protein
|
|
122092-122856
|
+
|
CDS
|
|
|
transcriptional regulator for pyruvate dehydrogenase complex
|
|
| |
Reported regulatory
sites for aroP:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
121597-121618
|
|
tyrR
|
transcriptional regulation of aroF aroG tyrA and aromatic amino acid transport
|
|
121620-121641
|
|
tyrR
|
transcriptional regulation of aroF aroG tyrA and aromatic amino acid transport
|
|
| |
| Species with
an ortholog: PA ST EC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
4.692
|
121622-121639 R
|
tttga TGTAAACAAATTAATACA acaaa
|
tyrR
|
18
|
-
|
|
|
|
|
2.833
|
122006-122026 R
|
cgcta AAGTAACAAAGTATTCACCTT atgtc
|
-
|
0
|
-
|
|
|
|
|
2.394
|
121863-121886 R
|
agttt TTTAACGATTATTAAACTATAAAA atccg
|
-
|
0
|
-
|
|
|
|
|
2.394
|
121811-121834 R
|
accaa TTTTGTGATTTTTAATTCAATTAA aacga
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
6.66
|
|
p=0.05
|
5.31
|
|
p=0.1
|
4.59
|
|
p=0.2
|
3.95
|
|
|