artJ
 
Information for artJ, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
897741-898868
+
CDS
putative enzyme
899067-899798
-
CDS
artJ
arginine 3rd transport system periplasmic binding protein
900089-900757
-
CDS
arginine 3rd transport system permease protein
 
Reported regulatory sites for artJ:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: ST EC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
5.148
899901-899919 R
ccgtc TTTTTTATTTCATTTAAAT tattt
-
0
-
5.148
899873-899891 R
taatc ATGTTTATTGCATATAAAT tcact
-
0
-
4.258
899844-899864 R
cttga TGGCATTGTTATCCCATGCCG cagac
-
0
-
4.023
899922-899944 R
gaaga CGGACAACCCACTAAGTTGTCCG tcttt
-
0
-
 
Critical MAP values:
p=0.01
7.30
p=0.05
6.05
p=0.1
5.26
p=0.2
4.60

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