aspA
 
Information for aspA, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
4363050-4364351
-
CDS
anaerobic dicarboxylate transport
4364469-4365950
-
CDS
aspA
aspartate ammonia-lyase (aspartase)
4366341-4366718
+
CDS
orf; hypothetical protein
 
Reported regulatory sites for aspA:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI ST EC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
4.764
4366281-4366300 R
gaata AAGATTGAAATCTCAATATA gacat
-
0
-
2.625
4366113-4366135 R
tgcgc AACTATTTTTGGTAGTAATCCCA aagcg
-
0
-
2.625
4366082-4366104 R
cggtg ATCTATTTCACAAATTAATAATT aaggg
-
0
-
2.504
4365966-4365987 R
gataa TCGTCGGTCGAAAAACATTCGA aacca
-
0
-
 
Critical MAP values:
p=0.01
6.66
p=0.05
5.31
p=0.1
4.59
p=0.2
3.95

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