aspS
 
Information for aspS, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1946204-1946656
-
CDS
dATP pyrophosphohydrolase
1946774-1948546
-
CDS
aspS
aspartate tRNA synthetase
1948823-1949422
+
CDS
orf; hypothetical protein
 
Reported regulatory sites for aspS:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
2.240
1948774-1948790 R
acgac AAATTTTGTTAATTTTT atgag
-
0
-
2.131
1948636-1948652 R
ccagt ATAATAGCCGCCTTTTT tcatt
-
0
-
1.439
1948656-1948678 R
caggc TCTTACGGTGCGGCAGAATTTCC agtat
-
0
-
1.439
1948593-1948615 R
ataca GCTAACGCTGCGACTTGGTCACC tgcgc
-
0
-
 
Critical MAP values:
p=0.01
4.80
p=0.05
3.45
p=0.1
2.95
p=0.2
2.42

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