|
asr
|
| |
| Information
for asr, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
1667723-1668976
|
+
|
CDS
|
|
|
putative transport protein
|
|
1669373-1669708
|
+
|
CDS
|
asr
|
|
acid shock protein
|
|
1669984-1670805
|
+
|
CDS
|
|
|
orf; hypothetical protein
|
|
| |
Reported regulatory
sites for asr:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: ST EC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
2.967
|
1669288-1669308
|
tacat ATCGTTACACGCTGAAACCAA ccact
|
-
|
0
|
-
|
|
|
|
|
1.938
|
1669258-1669280
|
ttatc AACGCTGTAATTTATTCAGCGTT tgtac
|
-
|
0
|
-
|
|
|
|
|
1.938
|
1669334-1669356
|
ttccc AGGGATATAGTTATTTCAACGGC cccgc
|
-
|
0
|
-
|
|
|
|
|
1.917
|
1669072-1669088
|
agcca ATTCCCGCAGCGCGTCT agcgt
|
-
|
0
|
-
|
|
|
|
|
1.917
|
1669354-1669370
|
tcaac GGCCCCGCAGTGGGGTT aaatg
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
7.30
|
|
p=0.05
|
6.05
|
|
p=0.1
|
5.26
|
|
p=0.2
|
4.60
|
|
|