asr
 
Information for asr, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1667723-1668976
+
CDS
putative transport protein
1669373-1669708
+
CDS
asr
acid shock protein
1669984-1670805
+
CDS
orf; hypothetical protein
 
Reported regulatory sites for asr:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: ST EC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
2.967
1669288-1669308
tacat ATCGTTACACGCTGAAACCAA ccact
-
0
-
1.938
1669258-1669280
ttatc AACGCTGTAATTTATTCAGCGTT tgtac
-
0
-
1.938
1669334-1669356
ttccc AGGGATATAGTTATTTCAACGGC cccgc
-
0
-
1.917
1669072-1669088
agcca ATTCCCGCAGCGCGTCT agcgt
-
0
-
1.917
1669354-1669370
tcaac GGCCCCGCAGTGGGGTT aaatg
-
0
-
 
Critical MAP values:
p=0.01
7.30
p=0.05
6.05
p=0.1
5.26
p=0.2
4.60

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