atoD
 
Information for atoD, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
2319886-2321271
+
CDS
response regulator of ato; ornithine decarboxylase antizyme (sensor ATOS)
2321467-2322129
+
CDS
atoD
acetyl-CoA:acetoacetyl-CoA transferase alpha subunit
2322129-2322779
+
CDS
acetyl-CoA:acetoacetyl-CoA transferase beta subunit
 
Reported regulatory sites for atoD:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: HI PA SP EC
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
1.305
2321375-2321390
caatt AGTTAAATAACTAAAT ccaat
-
0
-
1.005
2321285-2321302
cttgc TATGCAGAAATTTGCACA gtgcg
-
0
-
1.005
2321304-2321321
cacag TGCGCAATTTTCTGCATA gccgc
-
0
-
0.587
2321415-2321434
actcc CCTTGCTATTGCCTGACTGT accca
-
0
-
 
Critical MAP values:
p=0.01
3.02
p=0.05
2.31
p=0.1
1.98
p=0.2
1.61

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