b0379
 
Information for b0379, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
397096-398190
+
CDS
orf; hypothetical protein
398249-398557
-
CDS
b0379
orf; hypothetical protein
398685-399029
+
CDS
orf; hypothetical protein
 
Reported regulatory sites for b0379:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: ST EC
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
4.557
398635-398658 R
tcaat TTACCATGATTCTGATATTGACAA tctaa
-
0
-
3.782
398610-398628 R
ctaaa TGACCTGTCAGACTTGCCA taagc
-
0
-
1.360
398585-398605 R
ataag CCGCTGGTATCACACCAGAAG agaag
-
0
-
 
Critical MAP values:
p=0.01
7.59
p=0.05
6.45
p=0.1
5.76
p=0.2
5.04

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