|
b0805
|
| |
| Information
for b0805, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
837753-838466
|
-
|
CDS
|
|
|
putative enzyme
|
|
838472-840754
|
-
|
CDS
|
b0805
|
|
putative outer membrane receptor for iron transport
|
|
841019-841423
|
-
|
CDS
|
|
|
orf; hypothetical protein
|
|
| |
Reported regulatory
sites for b0805:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: PA EC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
0.318
|
840863-840882 R
|
aagtg ATAATGCTTATCAAAATTAT tatca
|
-
|
0
|
-
|
|
|
|
|
0.312
|
840981-841000 R
|
actgc ATTCGCCTCTGGATGCAGTT ttcgt
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
4.78
|
|
p=0.05
|
3.24
|
|
p=0.1
|
2.72
|
|
p=0.2
|
2.16
|
|
|