|
b0836
|
| |
| Information
for b0836, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
875933-877258
|
-
|
CDS
|
|
|
orf; hypothetical protein
|
|
877471-877854
|
+
|
CDS
|
b0836
|
|
putative receptor
|
|
877965-879080
|
+
|
CDS
|
|
|
putative dehydrogenase
|
|
| |
Reported regulatory
sites for b0836:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: ST EC |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
4.028
|
877300-877321
|
caggg ATTCTACAGAGTTCTGGATAAA atttg
|
-
|
0
|
-
|
|
|
|
|
2.161
|
877321-877337
|
gataa AATTTGTATCGCAATCT cattc
|
-
|
0
|
-
|
|
|
|
|
1.536
|
877259-877278
|
ctcat AGCTTAAAAAATATTCAGTT acagg
|
-
|
0
|
-
|
|
|
|
|
1.536
|
877360-877379
|
gaagg AAATGTAAATTTTGTTAATT cggcg
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
7.59
|
|
p=0.05
|
6.45
|
|
p=0.1
|
5.76
|
|
p=0.2
|
5.04
|
|
|