b0845
 
Information for b0845, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
884539-885327
-
CDS
orf; hypothetical protein
885354-886562
-
CDS
b0845
putative DEOR-type transcriptional regulator
886646-887182
+
CDS
putative DEOR-type transcriptional regulator
 
Reported regulatory sites for b0845:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: PA ST EC
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
7.978
886607-886624 R
gcaat TGTGTACAAATGTACACA acctt
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.498
886592-886608 R
gtaca CAACCTTGCTAATGTTG tcttc
-
0
-
 
Critical MAP values:
p=0.01
6.82
p=0.05
5.66
p=0.1
5.03
p=0.2
4.36

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