|
b0868
|
| |
| Information
for b0868, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
904136-904966
|
+
|
CDS
|
|
|
putative regulator
|
|
904963-906012
|
-
|
CDS
|
b0868
|
|
putative nucleotide di-P-sugar epimerase or dehydratase
|
|
906075-907535
|
-
|
CDS
|
|
|
putative dTDP-glucose enzyme
|
|
| |
Reported regulatory
sites for b0868:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: PA SP ST EC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
2.723
|
906050-906071 R
|
aatcg ACAAAACCTGCGTTATTCTTTC atgtt
|
-
|
0
|
-
|
|
|
|
|
2.723
|
906032-906047 R
|
ttcat GTTTCCCATTGCATCA tgggg
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
6.03
|
|
p=0.05
|
4.63
|
|
p=0.1
|
3.98
|
|
p=0.2
|
3.37
|
|
|