b0955
 
Information for b0955, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1015175-1015693
-
CDS
beta-hydroxydecanoyl thioester dehydrase; trans-2-decenoyl-ACP isomerase
1015762-1017522
-
CDS
b0955
putative ATP-dependent protease
1017708-1018160
+
CDS
putative dehydrogenase
 
Reported regulatory sites for b0955:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
4.839
1017680-1017698 R
atctc AATGTTACCGTGTAACTCT ttaca
-
0
-
4.166
1017646-1017665 R
atcag CTTTTTAGGCCAGTGAAGAA aagaa
-
0
-
4.166
1017531-1017550 R
gcggc TTTGACAACAGACTAAAAAA catca
-
0
-
0.682
1017630-1017645 R
aagaa AAGAATCTCCATCCTG tgagc
-
0
-
 
Critical MAP values:
p=0.01
6.66
p=0.05
5.31
p=0.1
4.59
p=0.2
3.95

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