b0967
 
Information for b0967, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1027627-1027995
-
CDS
orf; hypothetical protein
1028002-1029105
-
CDS
b0967
putative oxidoreductase
1029287-1029565
+
CDS
orf; hypothetical protein
 
Reported regulatory sites for b0967:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: PA SP ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
4.962
1029143-1029165 R
ccaaa GGGCGCGAAAAATCATTACTTCG tcgcc
-
0
-
4.103
1029122-1029143 R
acttc GTCGCCATCCGTGGGTCTTTTC cgggg
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
0.650
1029259-1029282 R
ttgct GCTCTCCTTATCCTTAATGGACGC gttgc
-
0
-
0.650
1029204-1029227 R
caatg ACGCCCATTTCTTTGCATCGACAG aaaag
-
0
-
 
Critical MAP values:
p=0.01
5.41
p=0.05
4.01
p=0.1
3.43
p=0.2
2.86

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