|
b1045
|
| |
| Information
for b1045, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
1104637-1104948
|
+
|
CDS
|
|
|
orf; hypothetical protein
|
|
1105043-1105576
|
+
|
CDS
|
b1045
|
|
putative polyprotein
|
|
1105518-1106999
|
+
|
CDS
|
|
|
putative synthase
|
|
| |
Reported regulatory
sites for b1045:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: PA ST EC |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
2.158
|
1104962-1104985
|
acaac TCACGTTGCTGAGCAGAAAAATGC gattt
|
-
|
0
|
-
|
|
|
|
|
1.111
|
1104998-1105014
|
ccaaa AAGCCTGCTGTACACTT aagaa
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
6.82
|
|
p=0.05
|
5.66
|
|
p=0.1
|
5.03
|
|
p=0.2
|
4.36
|
|
|