|
b1191
|
| |
| Information
for b1191, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
1238102-1239172
|
+
|
CDS
|
|
|
alanine racemase 2; catabolic
|
|
1239558-1241168
|
-
|
CDS
|
b1191
|
|
orf; hypothetical protein
|
|
1241389-1242303
|
-
|
CDS
|
|
|
orf; hypothetical protein
|
|
| |
Reported regulatory
sites for b1191:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: PA SP ST EC VC |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
4.767
|
1241189-1241212 R
|
ttctt CCCGTCTTGGCATTCCTATTCTGG ttatt
|
-
|
0
|
-
|
|
|
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
4.073
|
1241260-1241282 R
|
ccaca ACAATAATTAGCCTTTTCATCTT aggat
|
-
|
0
|
-
|
|
|
|
|
2.447
|
1241354-1241372 R
|
ttcag GGCTAAGTAAAACGCTGTC tctgc
|
-
|
0
|
-
|
|
|
|
|
2.447
|
1241222-1241240 R
|
tcacc AGCAGTATATTACTTAGTT cattt
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
5.40
|
|
p=0.05
|
4.29
|
|
p=0.1
|
3.77
|
|
p=0.2
|
3.19
|
|
|