|
b1284
|
| |
| Information
for b1284, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
1341134-1341352
|
-
|
CDS
|
|
|
osmotically inducible lipoprotein
|
|
1341621-1342370
|
-
|
CDS
|
b1284
|
|
putative DEOR-type transcriptional regulator
|
|
1342781-1344766
|
-
|
CDS
|
|
|
orf; hypothetical protein
|
|
| |
Reported regulatory
sites for b1284:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: ST EC |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
3.240
|
1342574-1342597 R
|
aacgt ATTGATATTGTGTTAGATATCCTT gtggc
|
-
|
0
|
-
|
|
|
|
|
1.265
|
1342551-1342567 R
|
tggca GGCGATTACCACTCTGC gatcc
|
-
|
0
|
-
|
|
|
|
|
0.596
|
1342390-1342410 R
|
cagta TTTTTTTATTAAGTATTATAA cgtta
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
7.59
|
|
p=0.05
|
6.45
|
|
p=0.1
|
5.76
|
|
p=0.2
|
5.04
|
|
|