b1327
 
Information for b1327, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1387894-1388682
-
CDS
putative carboxypeptidase
1388957-1389889
-
CDS
b1327
orf; hypothetical protein
1390015-1390914
+
CDS
putative transcriptional regulator LYSR-type
 
Reported regulatory sites for b1327:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: PA EC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
3.485
1389976-1389991 R
ctatt AATCATTTAAATGATA ggtct
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
1.321
1389922-1389939 R
taatg ATCAATATCTATAGTGAT atcac
-
0
-
0.045
1389948-1389965 R
aatca TGATTTTGGGTCTAATCA actta
-
0
-
 
Critical MAP values:
p=0.01
4.78
p=0.05
3.24
p=0.1
2.72
p=0.2
2.16

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