b1329
 
Information for b1329, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1390015-1390914
+
CDS
putative transcriptional regulator LYSR-type
1391230-1392864
+
CDS
b1329
putative transport periplasmic protein
1392915-1393946
-
CDS
orf; hypothetical protein
 
Reported regulatory sites for b1329:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: ST EC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
6.858
1391190-1391211
tttgc ATTTCTTTAAGGCGAAACAAAT aatta
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
0.590
1390949-1390971
ttctc TTAACGTATTCTCAGTTCCTTTC aacgt
-
0
-
0.590
1391110-1391132
ttatt TACACTAAATCTGATTTGATATA ttgat
-
0
-
0.134
1391163-1391186
ccttt GTCACTTTTTTGATGGAAGTTGTT tgcat
-
0
-
 
Critical MAP values:
p=0.01
7.30
p=0.05
6.05
p=0.1
5.26
p=0.2
4.60

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