b1377
 
Information for b1377, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1433209-1433715
-
CDS
putative filament protein
1433784-1434917
-
CDS
b1377
putative outer membrane protein
1435284-1438808
-
CDS
putative oxidoreductase; Fe-S subunit
 
Reported regulatory sites for b1377:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: ST EC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
2.680
1435101-1435122 R
tagca AATTAAAAGTATAATTTTTATT ttgta
-
0
-
2.380
1435247-1435264 R
gatta TCCAATTCTAAAAAAAAA gcccg
-
0
-
1.974
1435075-1435098 R
atttt GTATGTATTATCTTCGATACATTC accag
-
0
-
 
Critical MAP values:
p=0.01
7.30
p=0.05
6.05
p=0.1
5.26
p=0.2
4.60

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