|
b1439
|
| |
| Information
for b1439, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
1507511-1507948
|
+
|
CDS
|
|
|
orf; hypothetical protein
|
|
1508027-1509433
|
+
|
CDS
|
b1439
|
|
multi modular; putative transcriptional regulator; also putative ATP-binding component of a transport system
|
|
1509678-1510823
|
+
|
CDS
|
|
|
putative transport protein
|
|
| |
Reported regulatory
sites for b1439:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: PA ST EC VC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
4.192
|
1507964-1507983
|
cgaaa AGTTGTCATTTTTAACAACT gatat
|
-
|
0
|
-
|
|
|
|
|
0.020
|
1507989-1508012
|
gatat AGACTGCCGAATCATCTGCACATA attac
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
6.03
|
|
p=0.05
|
4.63
|
|
p=0.1
|
3.98
|
|
p=0.2
|
3.37
|
|
|