b1452
 
Information for b1452, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1518987-1521089
-
CDS
putative outer membrane receptor for iron transport
1521331-1522392
+
CDS
b1452
putative receptor
1522505-1524055
-
CDS
L-asparagine permease
 
Reported regulatory sites for b1452:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: ST EC
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
4.139
1521228-1521243
gagaa AATAATGATTACCATT cccat
-
0
-
3.206
1521163-1521184
aacgg CACAATACGTTAAGTAATTGAG aaaat
-
0
-
1.379
1521245-1521261
cattc CCATTTATAACAAGAGC gtaac
-
0
-
 
Critical MAP values:
p=0.01
7.59
p=0.05
6.45
p=0.1
5.76
p=0.2
5.04

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