|
b1452
|
| |
| Information
for b1452, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
1518987-1521089
|
-
|
CDS
|
|
|
putative outer membrane receptor for iron transport
|
|
1521331-1522392
|
+
|
CDS
|
b1452
|
|
putative receptor
|
|
1522505-1524055
|
-
|
CDS
|
|
|
L-asparagine permease
|
|
| |
Reported regulatory
sites for b1452:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: ST EC |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
4.139
|
1521228-1521243
|
gagaa AATAATGATTACCATT cccat
|
-
|
0
|
-
|
|
|
|
|
3.206
|
1521163-1521184
|
aacgg CACAATACGTTAAGTAATTGAG aaaat
|
-
|
0
|
-
|
|
|
|
|
1.379
|
1521245-1521261
|
cattc CCATTTATAACAAGAGC gtaac
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
7.59
|
|
p=0.05
|
6.45
|
|
p=0.1
|
5.76
|
|
p=0.2
|
5.04
|
|
|