b1472
 
Information for b1472, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1542782-1543738
-
CDS
putative glycoportein
1543762-1544052
-
CDS
b1472
putative outer membrane porin protein
1544312-1545193
-
CDS
orf; hypothetical protein
 
Reported regulatory sites for b1472:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: ST EC
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
4.830
1544176-1544191 R
atcga TAAATAATATTATTTC atcta
-
0
-
3.503
1544110-1544125
acggc GTCATTTATAAATGAC atact
-
0
-
-
2.499
1544128-1544144 R
accat TCTATTTTAAAAACAGT atgtc
-
0
-
 
Critical MAP values:
p=0.01
7.59
p=0.05
6.45
p=0.1
5.76
p=0.2
5.04

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