|
b1501
|
| |
| Information
for b1501, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
1581786-1581983
|
-
|
CDS
|
|
|
orf; hypothetical protein
|
|
1582231-1584510
|
-
|
CDS
|
b1501
|
|
putative oxidoreductase; major subunit
|
|
1584844-1585758
|
-
|
CDS
|
|
|
putative adhesin; similar to FimH protein
|
|
| |
Reported regulatory
sites for b1501:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: PA EC |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
2.070
|
1584764-1584782 R
|
ttttg TGAAGGCTATTAGCCTACA cctgt
|
-
|
0
|
-
|
|
-
|
|
|
0.250
|
1584604-1584619 R
|
aaaga GAGTAGTCCCCTACTC ttata
|
-
|
0
|
-
|
|
-
|
|
|
0.000
|
1584634-1584657 R
|
attta ATCTATTGTTTAACGATAATAGAT taaaa
|
-
|
0
|
-
|
|
-
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
3.34
|
|
p=0.05
|
2.41
|
|
p=0.1
|
2.01
|
|
p=0.2
|
1.55
|
|
|