|
b1519
|
| |
| Information
for b1519, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
1605023-1605313
|
+
|
CDS
|
|
|
orf; hypothetical protein
|
|
1605370-1606128
|
+
|
CDS
|
b1519
|
|
putative enzyme
|
|
1606132-1607097
|
-
|
CDS
|
|
|
orf; hypothetical protein
|
|
| |
Reported regulatory
sites for b1519:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: PA EC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
0.922
|
1605326-1605341
|
ttatc AATTTTATCTACAATT ggggt
|
-
|
0
|
-
|
|
|
|
|
0.176
|
1605343-1605359
|
aattg GGGTAACGCGCTGACGG gagta
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
4.78
|
|
p=0.05
|
3.24
|
|
p=0.1
|
2.72
|
|
p=0.2
|
2.16
|
|
|