|
b1525
|
| |
| Information
for b1525, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
1610349-1611275
|
-
|
CDS
|
|
|
putative glutaminase
|
|
1611339-1612751
|
-
|
CDS
|
b1525
|
|
putative aldehyde dehydrogenase
|
|
1612828-1613709
|
+
|
CDS
|
|
|
putative transcriptional regulator LYSR-type
|
|
| |
Reported regulatory
sites for b1525:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: ST EC |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
5.627
|
1612783-1612799 R
|
tggct TAATATTATTCATTTTA aagca
|
-
|
0
|
-
|
|
|
|
|
5.500
|
1612808-1612824 R
|
atagc ATTCTCGATTCGTGAAT aagtg
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
7.59
|
|
p=0.05
|
6.45
|
|
p=0.1
|
5.76
|
|
p=0.2
|
5.04
|
|
|