|
b1588
|
| |
| Information
for b1588, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
1656093-1658519
|
+
|
CDS
|
|
|
putative oxidoreductase; major subunit
|
|
1658577-1661003
|
+
|
CDS
|
b1588
|
|
putative oxidoreductase; major subunit
|
|
1661014-1661631
|
+
|
CDS
|
|
|
putative oxidoreductase; Fe-S subunit
|
|
| |
Reported regulatory
sites for b1588:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: HI ST EC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
1.729
|
1658551-1658566
|
gacat TTTGTTTGAAAAGCAA taagt
|
-
|
0
|
-
|
|
|
|
|
0.499
|
1658523-1658545
|
aaccc ACGACAACCATAAATTCTGGCAT gacat
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
6.66
|
|
p=0.05
|
5.31
|
|
p=0.1
|
4.59
|
|
p=0.2
|
3.95
|
|
|