b1593
 
Information for b1593, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1663279-1664595
+
CDS
putative chloride channel
1664548-1665255
-
CDS
b1593
orf; hypothetical protein
1665368-1666588
-
CDS
putative NAGC-like transcriptional regulator
 
Reported regulatory sites for b1593:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
6.505
1665325-1665346 R
tacca AAATTTGCGCTATCTCAATTTG ggcca
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
5.180
1665353-1665369 R
gggtt AACATTTTTTAACTGTT ctacc
-
0
-
3.792
1665269-1665291 R
aggtt AATTATTTTCCTGGTTTATATTT gtgaa
-
0
-
 
Critical MAP values:
p=0.01
6.66
p=0.05
5.31
p=0.1
4.59
p=0.2
3.95

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