b1600
 
Information for b1600, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1670844-1671173
-
CDS
possible chaperone
1671160-1671525
-
CDS
b1600
possible chaperone
1671937-1672971
+
CDS
putative transport protein
 
Reported regulatory sites for b1600:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: PA ST EC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
4.480
1671774-1671789 R
ctacc GAGGACAATTATCATC cgcga
-
0
-
4.480
1671736-1671751 R
acact GCGGATAATTGTAATA ttatg
-
0
-
3.443
1671651-1671672 R
cacta TCTTGCTCGTAGGTGAGCAGCA ctggc
-
0
-
3.443
1671528-1671549 R
taaaa TAATTCTCTTGCAGGAGAAGGA caatg
-
0
-
2.384
1671830-1671851 R
gtaaa GAAGTGAAAATATTTTGAGTTA attct
-
0
-
 
Critical MAP values:
p=0.01
6.66
p=0.05
5.31
p=0.1
4.59
p=0.2
3.95

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