|
b1601
|
| |
| Information
for b1601, and also upstream and downstream flanking genes: |
|
Genome
coordinates
|
Orientation
|
Gene
type
|
Name
|
EcoGene
|
Annotation
|
|
1671160-1671525
|
-
|
CDS
|
|
|
possible chaperone
|
|
1671937-1672971
|
+
|
CDS
|
b1601
|
|
putative transport protein
|
|
1672996-1674384
|
-
|
CDS
|
|
|
pyridine nucleotide transhydrogenase; beta subunit
|
|
| |
Reported regulatory
sites for b1601:
|
Genome
coordinates
|
Source
|
Transcription
factor
|
Transcription
factor annotation
|
|
| |
| Species with
an ortholog: ST EC YP |
| |
Predictions
with an average map value >= the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
7.483
|
1671831-1671850
|
gaatt AACTCAAAATATTTTCACTT cttta
|
-
|
0
|
-
|
|
|
|
|
| |
Predictions
with an average map value < the critical MAP value (p=0.05):
|
Avg.
MAP
|
Genome
coordinates
|
Sequence
|
Site
type
|
Overlap
(bp)
|
Repeat
|
Model
logo
|
Prediction
logo
|
Prediction
alignment
|
|
4.925
|
1671770-1671790
|
gtcat CGCGGATGATAATTGTCCTCG gtagt
|
-
|
0
|
-
|
|
|
|
|
4.596
|
1671732-1671747
|
tgtcc ATAATATTACAATTAT ccgca
|
-
|
0
|
-
|
|
|
|
|
| |
Critical
MAP values:
|
p=0.01
|
7.30
|
|
p=0.05
|
6.05
|
|
p=0.1
|
5.26
|
|
p=0.2
|
4.60
|
|
|