b1601
 
Information for b1601, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1671160-1671525
-
CDS
possible chaperone
1671937-1672971
+
CDS
b1601
putative transport protein
1672996-1674384
-
CDS
pyridine nucleotide transhydrogenase; beta subunit
 
Reported regulatory sites for b1601:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: ST EC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
7.483
1671831-1671850
gaatt AACTCAAAATATTTTCACTT cttta
-
0
-
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
4.925
1671770-1671790
gtcat CGCGGATGATAATTGTCCTCG gtagt
-
0
-
4.596
1671732-1671747
tgtcc ATAATATTACAATTAT ccgca
-
0
-
 
Critical MAP values:
p=0.01
7.30
p=0.05
6.05
p=0.1
5.26
p=0.2
4.60

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