b1624
 
Information for b1624, and also upstream and downstream flanking genes:
Genome coordinates
Orientation
Gene type
Name
EcoGene
Annotation
1700257-1701258
+
CDS
adenosine deaminase
1701292-1702371
-
CDS
b1624
orf; hypothetical protein
1702973-1703188
+
CDS
orf; hypothetical protein
 
Reported regulatory sites for b1624:
Genome coordinates
Source
Transcription factor
Transcription factor annotation
 
Species with an ortholog: PA ST EC VC YP
 
Predictions with an average map value >= the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
 
Predictions with an average map value < the critical MAP value (p=0.05):
Avg. MAP
Genome coordinates
Sequence
Site type
Overlap (bp)
Repeat
Model logo
Prediction logo
Prediction alignment
1.105
1702585-1702608 R
aagaa CGATCCAACCTGTTAATTCAATAA gacga
-
0
-
1.105
1702525-1702548 R
ttgat CCATTAACTTCAGGGGGTAAATGT tactt
-
0
-
0.872
1702813-1702828 R
aaaag AGTAACGCGCTTTACT atccc
-
0
-
0.630
1702792-1702811 R
tacta TCCCTGACAATCACCAACAA catcg
-
0
-
0.630
1702648-1702667 R
tcagg TGGCTGATAGTTGTCAATGT gactc
-
0
-
 
Critical MAP values:
p=0.01
6.03
p=0.05
4.63
p=0.1
3.98
p=0.2
3.37

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